STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASB16Ankyrin repeat and SOCS box containing 16. (452 aa)    
Predicted Functional Partners:
TSNAXIP1
Translin associated factor X interacting protein 1.
    
 0.576
HIF1AN
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
 
 0.537
NDUFAF5
NADH:ubiquinone oxidoreductase complex assembly factor 5.
    
 
 0.510
ASB11
Ankyrin repeat and SOCS box containing 11.
  
 
 0.508
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.471
ASB12
Ankyrin repeat and SOCS box containing 12.
   
 
 0.465
LRRC41
Leucine rich repeat containing 41.
     
 0.457
COMMD9
COMM domain containing 9.
    
  0.456
COPS8
COP9 signalosome subunit 8.
    
 0.454
COMMD5
COMM domain containing 5.
   
  0.452
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.