STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SQW3_LOXAFUncharacterized protein. (400 aa)    
Predicted Functional Partners:
GPR176
G protein-coupled receptor 176.
 
    
 0.729
DYTN
Dystrotelin.
    
 
 0.570
ZNF395
Zinc finger protein 395.
      
 0.497
NIM1K
NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.488
ELF2
E74 like ETS transcription factor 2.
      
 0.465
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.404
EPB41L5
Erythrocyte membrane protein band 4.1 like 5.
     
 0.401
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.