STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATAD2BGATA zinc finger domain containing 2B. (593 aa)    
Predicted Functional Partners:
MTA2
Metastasis associated 1 family member 2.
   
 0.913
CHD4
Uncharacterized protein.
   
 0.907
CHD3
Chromodomain helicase DNA binding protein 3.
   
 0.906
MTA1
Metastasis associated 1.
   
 0.906
MTA3
Metastasis associated 1 family member 3.
   
 0.899
GATAD2A
GATA zinc finger domain containing 2A.
   
0.838
CHD5
Chromodomain helicase DNA binding protein 5.
   
 0.781
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.771
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.771
MBD2
Methyl-CpG binding domain protein 2.
   
 0.748
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.