Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GATA4GATA binding protein 4. (383 aa)    
Predicted Functional Partners:
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.991
NKX2-5
NK2 homeobox 5.
   
 0.990
SRF
Serum response factor.
    
 0.954
FOXA2
Forkhead box A2.
   
 0.948
NFATC4
Nuclear factor of activated T cells 4.
     
 0.906
NFATC3
Nuclear factor of activated T cells 3.
    
 0.898
TBX20
T-box transcription factor 20.
   
 0.897
NFATC2
Nuclear factor of activated T cells 2.
    
 0.887
NFATC1
Nuclear factor of activated T cells 1.
    
 0.885
SQSTM1
Sequestosome 1.
    
 0.882
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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