STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REREArginine-glutamic acid dipeptide repeats. (1558 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.725
NR2E1
Nuclear receptor subfamily 2 group E member 1.
    
 0.640
KMT2D
Lysine methyltransferase 2D.
   
 
 0.567
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 0.548
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
      
 0.543
CHD7
Chromodomain helicase DNA binding protein 7.
   
 0.538
WDR64
WD repeat domain 64.
   
  
 0.537
RANBP1
RAN binding protein 1.
      
 0.532
G3ULJ1_LOXAF
RanBD1 domain-containing protein.
      
 0.532
FAT3
FAT atypical cadherin 3.
    
 0.530
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.