STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OLA1Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (396 aa)    
Predicted Functional Partners:
MCTS1
Malignant T-cell-amplified sequence.
 
 
  
 0.918
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.874
PTRH1
Peptidyl-tRNA hydrolase 1 homolog.
  
  
 0.810
BARD1
BRCA1 associated RING domain 1.
   
 
 0.754
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.719
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.710
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.709
YARS1
Tyrosine--tRNA ligase.
  
  
 0.687
FARSB
Phenylalanyl-tRNA synthetase subunit beta.
  
  
 0.682
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.679
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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