STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPIND1Serpin family D member 1; Belongs to the serpin family. (454 aa)    
Predicted Functional Partners:
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.994
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
  
 
0.951
F13B
Coagulation factor XIII B chain.
   
 
 0.930
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
  
  
0.885
SERPINF2
Serpin family F member 2; Belongs to the serpin family.
  
 
0.885
C5
Complement C5.
   
 0.843
LZTR1
Leucine zipper like transcription regulator 1.
      
 0.825
SNAP29
Synaptosome associated protein 29.
     
 0.814
SERPINA4
Serpin family A member 4; Belongs to the serpin family.
  
 
 
0.803
FGG
Fibrinogen gamma chain.
   
 0.796
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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