STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCUBMitochondrial calcium uniporter dominant negative beta subunit. (305 aa)    
Predicted Functional Partners:
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
    
 0.975
MICU1
Mitochondrial calcium uptake 1.
    
 0.975
MICU2
Mitochondrial calcium uptake 2.
    
 0.946
MICU3
Mitochondrial calcium uptake family member 3.
     
 0.849
MCU
Mitochondrial calcium uniporter.
  
 
0.833
MCUR1
Mitochondrial calcium uniporter regulator 1.
    
 
 0.734
PHB2
Prohibitin.
     
 0.605
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
 
   
 0.550
PHB
Prohibitin.
     
 0.531
CCDC3
Coiled-coil domain containing 3.
      
 0.525
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.