STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIARTCircadian associated repressor of transcription. (381 aa)    
Predicted Functional Partners:
C6orf62
Chromosome 6 open reading frame 62.
      
 0.450
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 
 0.445
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
      
 0.440
PLEKHF1
Pleckstrin homology and FYVE domain containing 1.
      
 0.440
PER3
Period circadian regulator 3.
   
 
 0.425
PER2
Period circadian regulator 2.
   
 
 0.425
PER1
Period circadian regulator 1.
   
 
 0.425
G3UII3_LOXAF
Uncharacterized protein.
  
   
 0.421
EFCAB12
EF-hand calcium binding domain 12.
  
     0.418
CRY2
Cryptochrome circadian regulator 2.
   
 
 0.412
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.