STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A5Solute carrier family 27 member 5. (539 aa)    
Predicted Functional Partners:
CYP27A1
Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.
   
 
 0.891
AMACR
Alpha-methylacyl-CoA racemase.
   
 
 0.869
BAAT
Bile acid-CoA:amino acid N-acyltransferase.
   
 
 0.843
ACOT8
Acyl-CoA thioesterase 8.
     
 0.815
SCP2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.814
SLC27A4
Solute carrier family 27 member 4.
  
  
 
0.773
ACOX2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.737
ACOX3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.729
BBS9
Bardet-Biedl syndrome 9.
   
 0.665
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.663
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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