STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin 3. (927 aa)    
Predicted Functional Partners:
TNPO1
Transportin 1.
   
 0.968
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 0.968
IPO11
Importin 11.
   
 
 0.943
TNPO2
Transportin 2.
   
 0.940
IPO9
Importin 9.
   
 
 0.935
IPO4
Importin 4.
   
 
 0.933
KPNB1
Karyopherin subunit beta 1.
   
 
 0.931
IPO13
Importin 13.
     
 0.930
CPSF7
Cleavage and polyadenylation specific factor 7.
   
 0.925
IPO5
Importin 5.
   
 
 0.920
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.