STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB20Zinc finger and BTB domain containing 20. (743 aa)    
Predicted Functional Partners:
ZBTB45
Zinc finger and BTB domain containing 45.
    
   0.664
SOX5
SRY-box transcription factor 5.
    
 
 0.663
CCDC134
Coiled-coil domain containing 134.
    
 0.640
CALB1
Calbindin 1.
    
 0.637
PVALB
Parvalbumin; Belongs to the parvalbumin family.
    
 0.621
ZHX2
Zinc fingers and homeoboxes 2.
    
 
 0.578
NUP35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 
 0.569
TANGO2
Transport and golgi organization 2 homolog.
      
 0.534
UBE2W
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.501
TIMM21
Translocase of inner mitochondrial membrane 21.
      
 0.500
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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