STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB20Zinc finger and BTB domain containing 20. (743 aa)    
Predicted Functional Partners:
SOX5
SRY-box transcription factor 5.
    
 
 0.697
PVALB
Parvalbumin; Belongs to the parvalbumin family.
    
 0.678
CALB1
Calbindin 1.
    
 0.614
DCX
Doublecortin.
      
 0.545
SATB2
DNA-binding protein SATB.
    
 
 0.494
FKTN
Fukutin.
   
 0.477
ZHX2
Zinc fingers and homeoboxes 2.
    
 
 0.458
NUP35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 
 0.450
G3T6B5_LOXAF
KCNQ_channel domain-containing protein.
      
 0.443
NDST4
N-deacetylase and N-sulfotransferase 4.
      
 0.442
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.