STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAT1LVesicle amine transport 1 like. (417 aa)    
Predicted Functional Partners:
FASN
Fatty acid synthase.
  
0.555
WWOX
Uncharacterized protein.
   
 0.553
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.553
CLEC3A
C-type lectin domain family 3 member A.
 
    
 0.535
SULF2
Extracellular sulfatase; Exhibits arylsulfatase activity and highly specific endoglucosamine-6-sulfatase activity. It can remove sulfate from the C- 6 position of glucosamine within specific subregions of intact heparin. Belongs to the sulfatase family.
      
 0.528
HPCAL1
Hippocalcin like 1.
   
 
 0.491
G3SZF5_LOXAF
Fe-ADH domain-containing protein.
     
 0.483
LYPD1
LY6/PLAUR domain containing 1.
      
 0.470
G3UGQ2_LOXAF
Uncharacterized protein.
   
 0.460
SYCE1L
Uncharacterized protein.
      
 0.456
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.