Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VAT1LVesicle amine transport 1 like. (417 aa)    
Predicted Functional Partners:
KANK3
ANK_REP_REGION domain-containing protein.
   
 
 0.819
TREX2
Three prime repair exonuclease 2.
    
 
 0.628
SYCE1L
Uncharacterized protein.
      
 0.626
MMRN2
Multimerin 2.
    
 
 0.609
FGD5
FYVE, RhoGEF and PH domain containing 5.
      
 0.592
SDR42E1
Short chain dehydrogenase/reductase family 42E, member 1; Belongs to the 3-beta-HSD family.
   
  
 0.587
CLEC3A
C-type lectin domain family 3 member A.
 
  
 0.574
NVL
Nuclear VCP like.
   
 
 0.573
SULF2
Extracellular sulfatase; Exhibits arylsulfatase activity and highly specific endoglucosamine-6-sulfatase activity. It can remove sulfate from the C- 6 position of glucosamine within specific subregions of intact heparin. Belongs to the sulfatase family.
   
  
 0.563
KANK1
Uncharacterized protein.
   
 
 0.551
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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