STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFT1Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family. (541 aa)    
Predicted Functional Partners:
ALG1
Glycos_transf_1 domain-containing protein.
   
 
 0.768
ALG11
ALG11 alpha-1,2-mannosyltransferase.
   
 
 0.745
ALG2
ALG2 alpha-1,3/1,6-mannosyltransferase.
   
 
 0.740
PSMB6
Proteasome subunit beta.
 
      0.708
G3U1V6_LOXAF
Glyco_tran_28_C domain-containing protein.
      
 0.582
TOR3A
Torsin family 3 member A.
      
 0.552
ACP6
Acid phosphatase 6, lysophosphatidic; Belongs to the histidine acid phosphatase family.
      
 0.535
RBM28
RNA binding motif protein 28.
      
 0.526
ALG13
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.522
MRPS18A
Mitochondrial ribosomal protein S18A.
      
 0.446
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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