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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35B1Solute carrier family 35 member B1. (322 aa)    
Predicted Functional Partners:
PWP2
WD_REPEATS_REGION domain-containing protein.
 
 
    0.893
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.602
FAM117A
Family with sequence similarity 117 member A.
 
    
 0.557
TMEM208
Transmembrane protein 208.
   
 
 0.528
DNAJB9
DnaJ heat shock protein family (Hsp40) member B9.
   
  
 0.456
IER3IP1
Uncharacterized protein.
      
 0.443
G3UBL3_LOXAF
Uncharacterized protein.
      
 0.439
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.438
SLC35C1
Solute carrier family 35 member C1.
   
  
 0.422
P4HB
Protein disulfide-isomerase.
   
 
 0.417
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.