STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF128Ring finger protein 128. (431 aa)    
Predicted Functional Partners:
OTUB1
Ubiquitin thioesterase.
    
 0.752
S100Z
Protein S100; Belongs to the S-100 family.
      
 0.677
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 0.656
USP8
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
    
 0.636
RNF150
Ring finger protein 150.
   
0.574
CCDC197
Coiled-coil domain containing 197.
    
 0.545
ADCYAP1
Adenylate cyclase activating polypeptide 1.
      
 0.534
KCNV2
Potassium voltage-gated channel modifier subfamily V member 2; Belongs to the potassium channel family.
    
 
 0.529
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.514
RNF130
Ring finger protein 130.
  
0.501
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.