STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF128Ring finger protein 128. (431 aa)    
Predicted Functional Partners:
OTUB1
Ubiquitin thioesterase.
    
 0.953
S100Z
Protein S100; Belongs to the S-100 family.
      
 0.824
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 0.810
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.735
USP8
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
    
 0.717
KCNV2
Potassium voltage-gated channel modifier subfamily V member 2; Belongs to the potassium channel family.
    
 
 0.692
ADCYAP1
Adenylate cyclase activating polypeptide 1.
      
 0.647
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.632
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
      
 0.620
CCDC197
Coiled-coil domain containing 197.
    
 0.590
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.