Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TRPC4APTransient receptor potential cation channel subfamily C member 4 associated protein. (797 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.974
G3T1T4_LOXAF
WD_REPEATS_REGION domain-containing protein.
   
 
 0.905
DCAF6
DDB1 and CUL4 associated factor 6.
    
 0.855
DDA1
DET1 and DDB1 associated 1.
    
  0.854
EDEM2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
 
 
  
 0.808
CUL4B
Cullin 4B; Belongs to the cullin family.
    
 0.806
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.806
DCAF12
DDB1 and CUL4 associated factor 12.
     
 0.796
DCAF5
DDB1 and CUL4 associated factor 5.
     
 0.759
WDTC1
WD and tetratricopeptide repeats 1.
     
 0.705
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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