Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATF4 | VSX2 | ENSLAFP00000010042 | ENSLAFP00000002396 | Activating transcription factor 4. | Visual system homeobox 2. | 0.499 |
| ATOH7 | G3U441_LOXAF | ENSLAFP00000017453 | ENSLAFP00000022599 | Atonal bHLH transcription factor 7. | Fork-head domain-containing protein. | 0.473 |
| ATOH7 | GAP43 | ENSLAFP00000017453 | ENSLAFP00000027636 | Atonal bHLH transcription factor 7. | Growth associated protein 43. | 0.441 |
| ATOH7 | VSX2 | ENSLAFP00000017453 | ENSLAFP00000002396 | Atonal bHLH transcription factor 7. | Visual system homeobox 2. | 0.626 |
| BHLHE22 | VSX2 | ENSLAFP00000019268 | ENSLAFP00000002396 | Basic helix-loop-helix family member e22. | Visual system homeobox 2. | 0.445 |
| G3U441_LOXAF | ATOH7 | ENSLAFP00000022599 | ENSLAFP00000017453 | Fork-head domain-containing protein. | Atonal bHLH transcription factor 7. | 0.473 |
| G3U441_LOXAF | VSX2 | ENSLAFP00000022599 | ENSLAFP00000002396 | Fork-head domain-containing protein. | Visual system homeobox 2. | 0.516 |
| GAP43 | ATOH7 | ENSLAFP00000027636 | ENSLAFP00000017453 | Growth associated protein 43. | Atonal bHLH transcription factor 7. | 0.441 |
| GAP43 | VSX2 | ENSLAFP00000027636 | ENSLAFP00000002396 | Growth associated protein 43. | Visual system homeobox 2. | 0.455 |
| LHX2 | VSX2 | ENSLAFP00000006568 | ENSLAFP00000002396 | LIM homeobox 2. | Visual system homeobox 2. | 0.473 |
| NXNL1 | VSX2 | ENSLAFP00000002095 | ENSLAFP00000002396 | Nucleoredoxin like 1. | Visual system homeobox 2. | 0.446 |
| POU4F2 | VSX2 | ENSLAFP00000001254 | ENSLAFP00000002396 | POU domain protein. | Visual system homeobox 2. | 0.415 |
| RCVRN | RHO | ENSLAFP00000009072 | ENSLAFP00000001142 | Recoverin. | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity). | 0.897 |
| RCVRN | VSX2 | ENSLAFP00000009072 | ENSLAFP00000002396 | Recoverin. | Visual system homeobox 2. | 0.453 |
| RHO | RCVRN | ENSLAFP00000001142 | ENSLAFP00000009072 | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity). | Recoverin. | 0.897 |
| RHO | VSX2 | ENSLAFP00000001142 | ENSLAFP00000002396 | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity). | Visual system homeobox 2. | 0.466 |
| VSX2 | ATF4 | ENSLAFP00000002396 | ENSLAFP00000010042 | Visual system homeobox 2. | Activating transcription factor 4. | 0.499 |
| VSX2 | ATOH7 | ENSLAFP00000002396 | ENSLAFP00000017453 | Visual system homeobox 2. | Atonal bHLH transcription factor 7. | 0.626 |
| VSX2 | BHLHE22 | ENSLAFP00000002396 | ENSLAFP00000019268 | Visual system homeobox 2. | Basic helix-loop-helix family member e22. | 0.445 |
| VSX2 | G3U441_LOXAF | ENSLAFP00000002396 | ENSLAFP00000022599 | Visual system homeobox 2. | Fork-head domain-containing protein. | 0.516 |
page 1 of 2