STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCD4ATP binding cassette subfamily D member 4. (602 aa)    
Predicted Functional Partners:
LMBRD1
LMBR1 domain containing 1.
    
 0.987
ABCD3
ATP binding cassette subfamily D member 3.
     
 0.877
ABCD2
ATP binding cassette subfamily D member 2.
   
 0.867
ABCD1
ATP binding cassette subfamily D member 1.
   
 0.867
PEX19
Uncharacterized protein.
    
 0.831
MMUT
Methylmalonyl-CoA mutase.
   
  
 0.820
SALL3
Spalt like transcription factor 3.
      
 0.736
ABCF3
ATP binding cassette subfamily F member 3.
   
  
 0.710
PEX3
Peroxisomal biogenesis factor 3.
   
 0.694
ANKH
ANKH inorganic pyrophosphate transport regulator.
    
   0.692
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.