STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (658 aa)    
Predicted Functional Partners:
NUP37
Nucleoporin 37.
   
 0.999
NUP133
Nucleoporin 133.
   
 0.999
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
   
 0.999
NUP43
Nucleoporin 43.
   
 0.999
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.999
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
NUP98
Nucleoporin 98.
   
 0.998
NUP160
Nucleoporin 160.
   
 0.998
NUP153
Nucleoporin 153.
    
 0.996
NUP188
Nucleoporin 188.
   
 0.994
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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