STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXL20F-box and leucine rich repeat protein 20. (436 aa)    
Predicted Functional Partners:
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.848
ZNF641
Zinc finger protein 641.
   
 
  0.654
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.636
G3U9C6_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.636
G3ULX5_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.636
RBX1
Ring-box 1.
    
 0.615
FBXO25
F-box protein 25.
   
 
 0.611
FBXO3
F-box protein 3.
    
 
 0.608
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 
 0.599
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.572
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.