STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKAP14Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
SPA17
Sperm surface protein Sp17; Sperm surface zona pellucida binding protein. Helps to bind spermatozoa to the zona pellucida with high affinity. Might function in binding zona pellucida and carbohydrates.
   
 
 0.963
TTC29
Tetratricopeptide repeat domain 29.
   
   0.894
PRKACB
Protein kinase cAMP-activated catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.857
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha; Belongs to the protein kinase superfamily.
    
 0.857
EFCAB7
EF-hand calcium binding domain 7.
    
   0.810
PRKAR1A
Protein kinase cAMP-dependent type I regulatory subunit alpha.
    
  0.789
PRKAR1B
Protein kinase cAMP-dependent type I regulatory subunit beta.
    
  0.789
PRKAR2A
Protein kinase cAMP-dependent type II regulatory subunit alpha.
    
  0.789
PRKAR2B
Protein kinase cAMP-dependent type II regulatory subunit beta.
    
  0.789
C20orf85
Chromosome 20 open reading frame 85.
   
   0.781
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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