Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKAPNFKB activating protein. (410 aa)    
Predicted Functional Partners:
FAM32A
Family with sequence similarity 32 member A.
    
 0.887
SLU7
SLU7 homolog, splicing factor.
   
 0.864
DDX41
DEAD-box helicase 41.
    
 0.863
CACTIN
Uncharacterized protein.
    
 0.838
PRKRIP1
PRKR interacting protein 1.
   
 
 0.826
CDC40
Cell division cycle 40.
    
 0.825
SDE2
SDE2 telomere maintenance homolog.
    
 0.821
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.820
CWC22
CWC22 spliceosome associated protein homolog.
   
  0.820
C9orf78
Chromosome 9 open reading frame 78.
   
  0.818
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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