STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEATR1U3snoRNP10 domain-containing protein. (1180 aa)    
Predicted Functional Partners:
UTP4
UTP4 small subunit processome component.
   
 0.999
UTP20
UTP20 small subunit processome component.
   
 0.998
UTP15
UTP15 small subunit processome component.
   
 0.997
WDR75
WD repeat domain 75.
   
 0.997
WDR36
WD repeat domain 36.
   
 0.997
PWP2
WD_REPEATS_REGION domain-containing protein.
   
 0.996
TBL3
Transducin beta like 3.
   
 0.996
WDR3
WD repeat domain 3.
   
 0.996
NOL6
Nucleolar protein 6.
   
 0.996
PDCD11
Programmed cell death 11.
   
 0.994
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.