STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SRH0_LOXAFUncharacterized protein. (248 aa)    
Predicted Functional Partners:
G3SVE7_LOXAF
Uncharacterized protein.
 
     0.950
TMEM52
Uncharacterized protein.
      
 0.582
SPEF2
Sperm flagellar 2.
    
 
 0.563
DRC1
Dynein regulatory complex subunit 1.
   
  
 0.551
CCDC40
Coiled-coil domain containing 40.
  
  
 0.551
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
    
 
 0.535
G3TK50_LOXAF
Uncharacterized protein.
    
 
 0.514
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.489
MIS12
MIS12 kinetochore complex component.
      
 0.484
SLC45A1
Solute carrier family 45 member 1.
      
 0.475
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.