STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCMTD2Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. (360 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
 
 0.823
ANKEF1
Ankyrin repeat and EF-hand domain containing 1.
      
 0.791
TBC1D17
TBC1 domain family member 17.
      
 0.644
TMEM64
Transmembrane protein 64.
      
 0.637
FBXL4
F-box and leucine rich repeat protein 4.
   
  
 0.632
RNF7
Ring finger protein 7.
   
   0.588
FICD
FIC domain containing.
      
 0.532
ZMYND8
Zinc finger MYND-type containing 8.
   
  
 0.515
SLC2A6
Solute carrier family 2 member 6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.512
WDYHV1
WDYHV motif containing 1.
      
 0.505
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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