Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC100672903Uncharacterized protein; Belongs to the cytochrome P450 family. (507 aa)    
Predicted Functional Partners:
CYP2U1
Cytochrome P450 family 2 subfamily U member 1; Belongs to the cytochrome P450 family.
  
0.819
CYP26B1
Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family.
  
  
0.812
CYP26A1
Cytochrome P450 family 26 subfamily A member 1; Belongs to the cytochrome P450 family.
  
  
0.806
ALOX12
Arachidonate 12-lipoxygenase, 12S type.
   
 0.791
ALOX5
Arachidonate 5-lipoxygenase.
   
 0.791
PLA2G12B
Phospholipase A2 group XIIB.
   
 
 0.785
EPHX2
Epoxide hydrolase 2.
  
 0.783
ALDH16A1
Aldedh domain-containing protein.
   
 0.783
PLA2G4F
Phospholipase A2.
   
 
 0.775
ALDH1A3
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.775
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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