STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLK3CDC like kinase 3. (552 aa)    
Predicted Functional Partners:
CLK2
CDC like kinase 2; Belongs to the protein kinase superfamily.
  
 
  
0.557
SCAMP5
Secretory carrier-associated membrane protein.
 
    
 0.549
RSRP1
Arginine and serine rich protein 1.
   
 
 0.539
TXLNA
Taxilin alpha.
      
 0.538
COQ7
5-demethoxyubiquinone hydroxylase, mitochondrial; Catalyzes the hydroxylation of 2-polyprenyl-3-methyl-6- methoxy-1,4-benzoquinol (DMQH2) during ubiquinone biosynthesis. Has also a structural role in the COQ enzyme complex, stabilizing other COQ polypeptides. Involved in lifespan determination in a ubiquinone- independent manner.
      
 0.525
TRA2A
Transformer 2 alpha homolog.
   
 
 0.513
SRSF2
RRM domain-containing protein.
    
 
 0.507
SRSF10
Serine and arginine rich splicing factor 10.
   
 
 0.506
TRA2B
Transformer 2 beta homolog.
   
 
 0.495
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
 
 0.467
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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