STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL55Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.949
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.941
MRPL51
Mitochondrial ribosomal protein L51.
   
 
 0.935
MRPS30
Mitochondrial ribosomal protein S30.
   
 
 0.932
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.931
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.924
MRPL43
Mitochondrial ribosomal protein L43.
   
 
 0.924
MRPS16
Mitochondrial ribosomal protein S16.
   
   0.915
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.913
G3TR24_LOXAF
Uncharacterized protein.
   
 
 0.910
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.