Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL55Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
G3TR24_LOXAF
Uncharacterized protein.
   
 0.985
MRPL46
Mitochondrial ribosomal protein L46.
   
 0.981
MRPL10
Mitochondrial ribosomal protein L10.
   
 0.981
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.970
MRPS30
Mitochondrial ribosomal protein S30.
   
 
 0.962
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.957
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.953
MRPL51
Mitochondrial ribosomal protein L51.
   
 
 0.945
MRPL58
Mitochondrial ribosomal protein L58.
   
 0.940
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.938
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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