STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SRJ6_LOXAFUncharacterized protein. (301 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
    
   0.588
H1-7
H1 histone family member N, testis specific.
      
 0.585
ZAR1
zf-3CxxC domain-containing protein.
   
  
 0.525
H2AZ2
Histone H2A; Belongs to the histone H2A family.
   
 0.509
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 0.509
DFFB
DNA fragmentation factor subunit beta.
    
 0.484
H1-0
H1 histone family member 0.
    
 
 0.475
G3UEP7_LOXAF
H15 domain-containing protein.
      
 0.443
LOC111752376
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.433
ENSLAFP00000016306
annotation not available
   
 0.433
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.