STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SRJ6_LOXAFUncharacterized protein. (301 aa)    
Predicted Functional Partners:
H1-7
H1 histone family member N, testis specific.
      
 0.737
FIGLA
Folliculogenesis specific bHLH transcription factor.
   
  
 0.633
H1-0
H1 histone family member 0.
   
 
 0.590
G3UEP7_LOXAF
H15 domain-containing protein.
      
 0.570
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.564
H2AZ2
Histone H2A; Belongs to the histone H2A family.
   
 
 0.558
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.558
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.523
ZP3
ZP domain-containing protein.
   
  
 0.510
ZAR1
zf-3CxxC domain-containing protein.
   
  
 0.503
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.