STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NRP1Neuropilin; Belongs to the neuropilin family. (921 aa)    
Predicted Functional Partners:
SEMA3A
Semaphorin 3A; Belongs to the semaphorin family.
    
 0.997
SEMA3B
Semaphorin 3B; Belongs to the semaphorin family.
    
 0.987
L1CAM
L1 cell adhesion molecule.
   
 0.968
SEMA3C
Semaphorin 3C; Belongs to the semaphorin family.
  
 
 0.959
SEMA3F
Semaphorin 3F; Belongs to the semaphorin family.
    
 0.955
KDR
Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.950
SEMA3E
Semaphorin 3E; Belongs to the semaphorin family.
    
 0.941
SEMA3D
Semaphorin 3D; Belongs to the semaphorin family.
    
 0.931
PLXNA2
Plexin A2.
   
 0.928
PLXNA4
Plexin A4.
   
 0.928
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.