STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MEOX1Mesenchyme homeobox 1. (254 aa)    
Predicted Functional Partners:
MEOX2
Mesenchyme homeobox 2.
   
   0.835
PAX1
Paired box 1.
    
 
 0.636
TCF15
Transcription factor 15.
    
 
 0.581
KRT24
Keratin 24; Belongs to the intermediate filament family.
      
 0.575
PAX9
Paired box 9.
    
 
 0.570
CHMP1A
Charged multivesicular body protein 1A.
    
   0.558
CHMP1B
Uncharacterized protein.
    
   0.558
SOST
Sclerostin.
      
 0.546
TBX6
T-box transcription factor 6.
    
 
 0.543
NFAT5
Nuclear factor of activated T cells 5.
      
 0.515
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.