STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTCL1Microtubule crosslinking factor 1. (1616 aa)    
Predicted Functional Partners:
RBM33
RNA binding motif protein 33.
      
 0.731
IGBP1
Uncharacterized protein.
      
 0.663
LHFPL2
LHFPL tetraspan subfamily member 2.
   
  
 0.643
EFCAB12
EF-hand calcium binding domain 12.
      
 0.621
GSTCD
Glutathione S-transferase C-terminal domain containing.
      
 0.595
HOOK2
Hook microtubule tethering protein 2.
      
 0.589
ANAPC4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
      
 0.567
NUDC
Nuclear distribution C, dynein complex regulator.
      
 0.552
MAPRE1
Microtubule associated protein RP/EB family member 1.
      
 0.546
G3U5N3_LOXAF
Uncharacterized protein.
    
   0.536
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.