STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C5General transcription factor IIIC subunit 5. (514 aa)    
Predicted Functional Partners:
GTF3C2
General transcription factor IIIC subunit 2.
   
 0.999
GTF3C4
General transcription factor IIIC subunit 4.
   
 0.999
GTF3C1
General transcription factor IIIC subunit 1.
   
 0.999
GTF3C3
General transcription factor IIIC subunit 3.
   
 0.998
GTF3C6
General transcription factor IIIC subunit 6.
   
 0.997
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
    
 0.913
BDP1
Uncharacterized protein.
    
 0.896
G3U6N7_LOXAF
SANT domain-containing protein.
    
 0.896
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
    
 0.809
ZNF512
Zinc finger protein 512.
   
 0.805
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.