STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SRM6_LOXAFUncharacterized protein; Belongs to the peptidase S1 family. (524 aa)    
Predicted Functional Partners:
LCN9
Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.567
CYB5R4
Cytochrome b5 reductase 4.
    
  0.554
G3U5F5_LOXAF
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.550
CST11
Cystatin 11.
   
 
 0.515
TRIB2
Tribbles pseudokinase 2.
    
 
 0.510
CST8
Cystatin 8.
     
 0.507
G3UER8_LOXAF
Peptidase S1 domain-containing protein.
  
 
  0.449
G5E6U8_LOXAF
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.447
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
   
 0.435
SLC7A8
Solute carrier family 7 member 8.
     
 0.433
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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