STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGAP1Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
G3U307_LOXAF
Uncharacterized protein.
 
      0.900
TANC1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
    
 
 0.606
SMAP2
Small ArfGAP2.
     
 0.585
UNC5B
Unc-5 netrin receptor B.
    
 0.548
ARAP3
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3.
     
 0.469
GIT2
GIT ArfGAP 2.
   
 0.450
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
     
 0.438
SMAP1
Small ArfGAP 1.
     
 0.433
GIT1
GIT ArfGAP 1.
   
 0.432
DLGAP2
DLG associated protein 2.
   
 
 0.429
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.