Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFP1ZFP1 zinc finger protein. (399 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
   
  0.871
MAP3K20
Protein kinase domain-containing protein.
    
  0.794
TRIM33
Tripartite motif containing 33.
   
  0.702
CASZ1
Uncharacterized protein.
    
 
 0.662
IPO8
Importin 8.
    
 
 0.578
IPO7
Importin 7.
    
 
 0.578
MGP
Matrix Gla protein; Associates with the organic matrix of bone and cartilage.
      
 0.572
TRIM24
Tripartite motif containing 24.
   
  0.560
CBX5
Chromobox 5.
    
  0.550
SESN3
Sestrin 3.
    
  0.511
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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