STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RYBPRING1 and YY1 binding protein. (218 aa)    
Predicted Functional Partners:
PCGF6
Polycomb group ring finger 6.
    
 0.962
RING1
Ring finger protein 1.
    
 0.949
PCGF5
Polycomb group ring finger 5.
    
 0.939
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.939
PCGF1
Polycomb group ring finger 1.
    
 0.937
PCGF2
Polycomb group ring finger 2.
    
 0.926
RNF2
RING-type domain-containing protein.
    
 0.912
G3UB93_LOXAF
RAWUL domain-containing protein.
    
 0.912
PCGF3
Polycomb group ring finger 3.
    
 0.911
G3THQ5_LOXAF
RING-type domain-containing protein.
    
 0.910
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.