STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC10A2Solute carrier family 10 member 2. (343 aa)    
Predicted Functional Partners:
EFNB2
Ephrin B2; Belongs to the ephrin family.
      
 0.723
FABP6
Fatty acid binding protein 6.
   
  
 0.601
NR1H4
Nuclear receptor subfamily 1 group H member 4.
   
  
 0.557
CYP7A1
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
   
  
 0.552
ABCB11
ATP binding cassette subfamily B member 11.
   
  
 0.501
SLC51B
Solute carrier family 51 beta subunit.
   
  
 0.497
G3TWY0_LOXAF
Uncharacterized protein.
   
  
 0.486
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
  
 0.484
DMXL1
Dmx like 1.
      
 0.483
ATP6V0C
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.473
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.