STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCAM1Vascular cell adhesion molecule 1. (736 aa)    
Predicted Functional Partners:
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
   
 0.828
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.827
ITGB2
Integrin beta.
   
 0.792
ITGAL
Integrin subunit alpha L; Belongs to the integrin alpha chain family.
   
 0.754
G3TVI4_LOXAF
Uncharacterized protein.
    
 0.743
CD44
CD44 molecule (Indian blood group).
      
 0.723
IL6
Interleukin 6.
   
 
 0.708
FN1
Fibronectin 1.
     
 0.693
CXCR4
C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.690
SPARC
Secreted protein acidic and cysteine rich.
   
  
 0.650
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.