Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM5Zinc finger MYM-type containing 5. (412 aa)    
Predicted Functional Partners:
QRICH1
Glutamine rich 1.
 
  
 
 0.622
DNAJC12
DnaJ heat shock protein family (Hsp40) member C12.
    
 
 0.585
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.584
PPP4R3B
Protein phosphatase 4 regulatory subunit 3B.
   
 
 0.518
RIPOR1
RHO family interacting cell polarization regulator 1.
    
 0.501
PSKH1
Protein serine kinase H1; Belongs to the protein kinase superfamily.
    
 0.494
EDC4
Enhancer of mRNA decapping 4.
    
 
 0.435
THAP9
THAP domain containing 9.
    
 0.423
CENPJ
Centromere protein J.
    
 
 0.416
MBOAT2
Membrane bound O-acyltransferase domain containing 2; Belongs to the membrane-bound acyltransferase family.
      
 0.406
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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