STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM5Zinc finger MYM-type containing 5. (412 aa)    
Predicted Functional Partners:
DNAJC12
DnaJ heat shock protein family (Hsp40) member C12.
   
 
 0.583
RBMS3
RNA binding motif single stranded interacting protein 3.
     
 0.580
GALNT13
Polypeptide N-acetylgalactosaminyltransferase 13.
     
 0.534
RNASEH2B
Ribonuclease H2 subunit B.
      
 0.519
QRICH1
Glutamine rich 1.
 
  
 
 0.517
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.435
ARID4A
AT-rich interaction domain 4A.
   
 0.416
AMBRA1
WD_REPEATS_REGION domain-containing protein.
  
  0.405
FCHSD2
FCH and double SH3 domains 2.
    
 0.403
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.