Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFAP300Cilia and flagella associated protein 300. (267 aa)    
Predicted Functional Partners:
CFAP298
Uncharacterized protein.
    
 
 0.668
PIH1D3
PIH1 domain containing 3.
    
 
 0.600
DNAAF5
Uncharacterized protein.
    
 
 0.592
LRRC6
Leucine rich repeat containing 6.
    
 0.584
DNAI1
Dynein axonemal intermediate chain 1.
    
 
 0.573
CFAP52
Cilia and flagella associated protein 52.
    
 0.572
LRRC56
Leucine rich repeat containing 56.
    
 0.565
CCDC151
Coiled-coil domain containing 151.
    
 0.554
DNAAF2
Protein kintoun; Required for cytoplasmic pre-assembly of axonemal dyneins, thereby playing a central role in motility in cilia and flagella. Involved in pre-assembly of dynein arm complexes in the cytoplasm before intraflagellar transport loads them for the ciliary compartment.
    
 
 0.540
PIH1D2
PIH1 domain containing 2.
   
 
 0.539
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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