STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAP1Transporter 1, ATP binding cassette subfamily B member. (750 aa)    
Predicted Functional Partners:
G3UDM5_LOXAF
Uncharacterized protein.
  
0.998
TAPBP
TAP binding protein.
   
 0.985
PDIA3
Protein disulfide-isomerase.
   
 0.955
CALR
Calreticulin.
   
 0.943
PSMB9
Proteasome subunit beta.
 
 
 0.910
PSMB8
Proteasome subunit beta.
 
 
 0.875
IRF1
Interferon regulatory factor.
   
 
 0.697
STAT1
Signal transducer and activator of transcription.
   
  
 0.648
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.646
NLRC5
Uncharacterized protein.
   
  
 0.616
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.