STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSG1Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
GSG1L
GSG1 like.
 
    
 0.899
RIMKLB
Ribosomal modification protein rimK like family member B.
      
 0.569
VWC2
Von Willebrand factor C domain containing 2.
      
 0.530
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.527
PRRT1
Proline rich transmembrane protein 1.
      
 0.520
CCDC63
Coiled-coil domain containing 63.
   
  
 0.493
NRN1
Neuritin 1.
      
 0.490
CCDC114
Coiled-coil domain containing 114.
   
  
 0.477
CNIH1
Cornichon family AMPA receptor auxiliary protein 1.
      
 0.445
SYNDIG1L
Synapse differentiation inducing 1 like.
      
 0.412
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.