STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBN1Ubinuclein 1. (1138 aa)    
Predicted Functional Partners:
CABIN1
Calcineurin binding protein 1.
   
 0.999
HIRA
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.997
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.997
ASF1B
Anti-silencing function 1B histone chaperone.
    
 0.977
DAXX
Death domain associated protein.
      
 0.747
ATRX
ATRX chromatin remodeler.
   
 
 0.663
RBM33
RNA binding motif protein 33.
   
  
 0.614
ERGIC2
ERGIC and golgi 2.
      
 0.592
RBM26
RNA binding motif protein 26.
      
 0.586
ZMYM3
Zinc finger MYM-type containing 3.
   
  
 0.558
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.