STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCN2Reticulocalbin 2. (337 aa)    
Predicted Functional Partners:
TSPAN3
Tetraspanin.
   
  
 0.588
NPTXR
Chromo domain-containing protein.
    
 
 0.586
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.580
APRT
Adenine phosphoribosyltransferase.
      
 0.457
CHP1
Calcineurin like EF-hand protein 1.
    
 
 0.456
TMBIM4
Uncharacterized protein; Belongs to the BI1 family.
      
 0.451
PDAP1
PDGFA associated protein 1.
      
 0.442
FAM124B
Family with sequence similarity 124 member B.
     
 0.442
STK40
Serine/threonine kinase 40.
    
 
 0.410
PSTPIP1
Proline-serine-threonine phosphatase interacting protein 1.
 
    
 0.409
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.