STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MIGA1Mitoguardin 1. (601 aa)    
Predicted Functional Partners:
MIGA2
Mitoguardin 2.
    
  0.929
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
      
 0.823
HDGFL3
HDGF like 3.
      
 0.763
CBL
Cbl proto-oncogene.
      
 0.699
NEXN
Nexilin F-actin binding protein.
 
    
 0.688
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.616
NCR3
Natural cytotoxicity triggering receptor 3.
     
  0.616
CSGALNACT2
Hexosyltransferase.
      
 0.564
CDAN1
Codanin 1.
      
 0.546
ZZZ3
Uncharacterized protein.
      
 0.546
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.