STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C7orf50Chromosome 7 open reading frame 50. (148 aa)    
Predicted Functional Partners:
DKC1
Dyskerin pseudouridine synthase 1.
   
   0.816
NHP2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.766
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
  
 0.727
DDX24
DEAD-box helicase 24.
   
 
 0.696
SURF6
Surfeit 6.
   
   0.656
DDX56
DEAD-box helicase 56.
   
   0.647
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.644
DNTTIP2
Deoxynucleotidyltransferase terminal interacting protein 2.
   
  
 0.643
RBM28
RNA binding motif protein 28.
   
   0.603
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.590
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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