STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7orf50Chromosome 7 open reading frame 50. (148 aa)    
Predicted Functional Partners:
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
  
 0.722
SURF6
Surfeit 6.
   
   0.678
DNTTIP2
Deoxynucleotidyltransferase terminal interacting protein 2.
   
  
 0.620
DKC1
Dyskerin pseudouridine synthase 1.
   
   0.619
FDXACB1
Ferredoxin-fold anticodon binding domain containing 1.
   
  
 0.581
EBNA1BP2
EBNA1 binding protein 2.
   
    0.564
PUM3
Pumilio RNA binding family member 3.
   
  
 0.551
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.511
UTP3
UTP3 small subunit processome component.
   
    0.480
CEBPZ
CCAAT enhancer binding protein zeta.
   
   0.475
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.