STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUBP1Far upstream element binding protein 1. (674 aa)    
Predicted Functional Partners:
KHSRP
KH-type splicing regulatory protein.
   
   0.994
PUF60
Poly(U) binding splicing factor 60.
   
 
 0.940
FUBP3
Far upstream element binding protein 3.
   
   0.929
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.813
AIMP2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
    
 
 0.786
TK1
Thymidine kinase.
      
 0.770
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta; Belongs to the 14-3-3 family.
   
  0.764
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 
 0.737
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 
 0.733
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.718
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.