STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCTD18Potassium channel tetramerization domain containing 18. (418 aa)    
Predicted Functional Partners:
BTBD10
BTB domain containing 10.
      
 0.657
PTPN21
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.
      
 0.630
KCTD10
Potassium channel tetramerization domain containing 10.
    
 0.603
KCTD11
Potassium channel tetramerization domain containing 11.
      
 0.596
TNFAIP1
TNF alpha induced protein 1.
    
 0.525
KCTD17
Potassium channel tetramerization domain containing 17.
    
 0.517
KCTD5
Potassium channel tetramerization domain containing 5.
    
 0.517
KCTD2
Potassium channel tetramerization domain containing 2.
    
 
 0.513
KCTD4
Potassium channel tetramerization domain containing 4.
      
 0.510
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.502
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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